Healthy Peanut Butter Greek Yogurt Cookies with Soft Centers

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By Gianna Poulef

Healthy Peanut Butter Greek Yogurt Cookies with Soft Centers

There’s something so comforting about a warm, soft cookie straight from the oven. Today, I’m beyond excited to share my Healthy Peanut Butter Greek Yogurt Cookies with Soft Centers—a sweet little indulgence that just happens to be packed with protein, naturally sweetened, and oh-so-easy to make. These cookies have been my go-to when I want a guilt-free treat that still tastes decadent.
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Overview of Recipe Content

These peanut butter Greek yogurt cookies are a hybrid between a soft, melt-in-your-mouth bakery-style cookie and a wholesome, protein-rich snack. They work beautifully for an afternoon tea, a quick breakfast bite, or even as a post-workout pick-me-up.

Why you’ll love them:

  • They have that soft, tender center with slightly crisp edges.
  • They’re naturally sweetened with honey or maple syrup.
  • The Greek yogurt makes them higher in protein and wonderfully moist.
  • Easy one-bowl recipe—no fancy equipment required.
  • Perfect for freezing and reheating.

Flavor profile:
Nutty, lightly sweet, with a hint of vanilla. Optional chocolate chips add melty pockets of indulgence.

Health perks:
Protein from Greek yogurt and peanut butter, healthy fats, and fiber from oat flour. Gluten-free (if you use certified GF oat flour).

Ingredients:

This Now, Make It Later!
  • ½ cup peanut butter (creamy or crunchy)
  • ½ cup Greek yogurt
  • 2 tablespoons honey or maple syrup
  • 1 egg
  • 1 teaspoon vanilla extract
  • ¾ cup oat flour
  • ¼ teaspoon baking powder
  • ¼ teaspoon salt
  • ¼ cup chocolate chips (optional)

Tools you’ll need:

  • Mixing bowl
  • Whisk or spatula
  • Baking sheet
  • Parchment paper
  • Measuring cups & spoons

Possible substitutions:

  • Swap oat flour for almond flour for a nuttier texture.
  • Use almond or cashew butter instead of peanut butter.
  • Replace chocolate chips with dried cranberries for a fruity twist.
  • Vegan? Swap the egg for a flax egg and use dairy-free yogurt.

How to Make Healthy Peanut Butter Greek Yogurt Cookies

  1. Preheat and prepare – Preheat your oven to 350°F (175°C) and line a baking sheet with parchment paper.
  2. Mix the wet ingredients – In a medium bowl, whisk together peanut butter, Greek yogurt, honey (or maple syrup), egg, and vanilla until smooth.
  3. Add the dry ingredients – Stir in oat flour, baking powder, and salt until a soft dough forms. The dough should be thick but scoopable.
  4. Fold in extras – If using, gently fold in chocolate chips.
  5. Scoop and bake – Drop spoonfuls of dough onto the prepared baking sheet, spacing them about 2 inches apart.
  6. Bake to perfection – Bake for 8–10 minutes, or until edges are set but centers are still soft.
  7. Cool slightly – Let cookies rest on the baking sheet for 5 minutes before transferring to a cooling rack.

Pro tip: Underbake slightly for that irresistibly gooey center.

What to Serve with Healthy Peanut Butter Greek Yogurt Cookies

  • A cold glass of almond milk or a warm cup of chai tea.
  • Pair with a fruit platter for a balanced snack.
  • Crumble over Greek yogurt for a cookie parfait.
  • Serve alongside my Banana Oatmeal Pancakes for a brunch spread.

Tips for Making It Perfect

  • Use room-temperature Greek yogurt for easier mixing.
  • Do not overbake—these cookies continue to set after cooling.
  • Chill dough for 15 minutes if it feels too sticky to scoop.
  • If using natural peanut butter, stir well before measuring to prevent oily spots.

Storage Instructions

  • Room temp: Store in an airtight container for up to 3 days.
  • Fridge: Keeps for 1 week.
  • Freezer: Freeze baked cookies for up to 3 months. Reheat in microwave for 15–20 seconds.

General Information

This cookie recipe is inspired by my grandmother’s soft peanut butter cookies but lightened up with Greek yogurt—a swap I discovered when trying to make her holiday recipe a bit healthier without losing that signature soft center. Perfect for school lunchboxes, weekend baking, or meal-prep snacks.

Frequently Asked Questions

1. Can I make these without an egg?
Yes, use a flax egg (1 tbsp flaxseed meal + 3 tbsp water).

2. Can I use flavored Greek yogurt?
Plain works best, but vanilla yogurt will add extra sweetness.

3. Can I double the recipe?
Absolutely! Just use two baking sheets or bake in batches.

4. Can I skip the chocolate chips?
Yes, or replace with chopped nuts for added crunch.

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Conclusion

These Healthy Peanut Butter Greek Yogurt Cookies with Soft Centers are proof that wholesome can still taste indulgent. Whether you’re baking for family, friends, or just for yourself, you’ll love their soft, chewy texture and nutty sweetness.
If peanut butter is your thing, you might also enjoy my Protein Cookie Dough or Healthy Peanut Butter Oat Bars.
Happy baking, friend—and don’t forget to tag me when you share your batch!

Interactive Elements

If you try this recipe, leave a review below—I’d love to hear your thoughts!
Share your cookie pics on Pinterest here or tag me on Instagram with @PoulefRecipe.

CaloriesProteinCarbsSugarFatSat. FatFiberSodium
1104g10g5g6g1.5g1g70mg
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Healthy Peanut Butter Greek Yogurt Cookies with Soft Centers


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  • Author: Poulef
  • Total Time: 20
  • Yield: 12 cookies 1x

Description

Soft, chewy, and packed with protein, these Healthy Peanut Butter Greek Yogurt Cookies are naturally sweetened, gluten-free, and irresistibly delicious.


Ingredients

Scale

½ cup peanut butter

½ cup Greek yogurt

2 tablespoons honey or maple syrup

1 egg

1 teaspoon vanilla extract

¾ cup oat flour

¼ teaspoon baking powder

¼ teaspoon salt

¼ cup chocolate chips (optional)


Instructions

1. Preheat oven to 350°F (175°C) and line a baking sheet with parchment paper.

2. In a medium bowl, whisk together peanut butter, Greek yogurt, honey, egg, and vanilla until smooth.

3. Stir in oat flour, baking powder, and salt until a dough forms.

4. Fold in chocolate chips, if using.

5. Scoop onto baking sheet and bake for 8–10 minutes until edges are set but centers are soft.

6. Cool for 5 minutes before transferring to a wire rack.

Notes

Use room temperature Greek yogurt for easier mixing.

Do not overbake—cookies will continue to set as they cool.

Swap peanut butter for almond or cashew butter for a different flavor.

  • Prep Time: 10
  • Cook Time: 10
  • Category: Dessert, Snack
  • Method: Baking
  • Cuisine: American

Nutrition

  • Serving Size: 1 cookie
  • Calories: 110
  • Sugar: 5
  • Sodium: 70
  • Fat: 6
  • Saturated Fat: 1.5
  • Unsaturated Fat: 4.5
  • Trans Fat: 0
  • Carbohydrates: 10
  • Fiber: 1
  • Protein: 4
  • Cholesterol: 15
Healthy Peanut Butter Greek Yogurt Cookies with Soft Centers
Gianna Poulef
CEO, Chef & Recipe Creator at BLYNO LLC | Website

I’m Gianna Poulef from Poulef Recipes. I love sharing perfected dishes from my kitchen. I’m sure they’ll earn a spot in your heart. Let’s savor this journey together!.

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